Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_03840 | Not Available | Positive | 822221 - 822676 | 16481.0 |
| malto-oligosyltrehalose trehalohydrolase | C5C18_03845 | Not Available | Negative | 822682 - 824445 | 64672.7 |
| malto-oligosyltrehalose synthase | C5C18_03850 | Not Available | Negative | 824527 - 826839 | 83582.9 |
| glycogen debranching enzyme glgx | C5C18_03855 | Not Available | Negative | 826841 - 829093 | 83466.5 |
| atp-dependent helicase | C5C18_03860 | Not Available | Negative | 829499 - 831301 | 66044.0 |
| sgnh/gdsl hydrolase family protein | C5C18_03865 | Not Available | Positive | 831418 - 832311 | 32816.7 |
| d-alanyl-d-alanine carboxypeptidase | C5C18_03870 | Not Available | Negative | 832363 - 833664 | 43728.5 |
| rrna methyltransferase | C5C18_03875 | Not Available | Negative | 833693 - 834502 | 28836.1 |
| nad-dependent deacetylase | C5C18_03880 | Not Available | Positive | 834575 - 835444 | 31044.9 |
| histidine phosphatase family protein | C5C18_03885 | Not Available | Positive | 835483 - 836115 | 21818.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |