Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_03740 | Not Available | Negative | 801482 - 801811 | 12655.5 |
| wyl domain-containing protein | C5C18_03745 | Not Available | Negative | 801808 - 803184 | 49137.0 |
| peptidylprolyl isomerase | C5C18_03750 | Not Available | Negative | 803836 - 804798 | 31745.3 |
| trna (adenine-n1)-methyltransferase | C5C18_03755 | Not Available | Negative | 804883 - 805911 | 36535.6 |
| hydrolase | C5C18_03760 | Not Available | Negative | 805908 - 806573 | 22897.4 |
| carboxylate--amine ligase | C5C18_03765 | Not Available | Positive | 806869 - 807729 | 31049.4 |
| cysteine--1-d-myo-inosityl 2-amino-2-deoxy-alpha-d-glucopyranoside ligase | C5C18_03770 | Not Available | Negative | 807772 - 809019 | 44419.1 |
| undecaprenyl-diphosphate phosphatase | C5C18_03775 | Not Available | Negative | 809020 - 809868 | 30074.7 |
| hypothetical protein | C5C18_03780 | Not Available | Negative | 809948 - 811267 | 46944.8 |
| Trna-leu | Not Available | Not Available | Positive | 811394 - 811478 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |