Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 32 | C5C18_03690 | Not Available | Positive | 791446 - 792684 | 44996.4 |
| short chain dehydrogenase | C5C18_03695 | Not Available | Negative | 792895 - 793653 | 26548.3 |
| nfed family protein | C5C18_03700 | Not Available | Positive | 793828 - 794295 | 16153.3 |
| hypothetical protein | C5C18_03705 | Not Available | Positive | 794292 - 795251 | 34276.6 |
| glycerophosphodiester phosphodiesterase | C5C18_03710 | Not Available | Positive | 795271 - 795930 | 23077.1 |
| rna polymerase-binding protein rbpa | C5C18_03715 | Not Available | Positive | 796042 - 796407 | 13784.2 |
| apolipoprotein n-acyltransferase | C5C18_03720 | Not Available | Negative | 796414 - 797958 | 54562.8 |
| rna helicase | C5C18_03725 | Not Available | Negative | 797955 - 800393 | 91363.3 |
| twin-arginine translocase subunit tatc | C5C18_03730 | Not Available | Negative | 800390 - 801151 | 27597.9 |
| twin-arginine translocase tata/tate family subunit | C5C18_03735 | Not Available | Negative | 801211 - 801474 | 9191.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |