Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfuration protein sufe | C5C18_03590 | Not Available | Negative | 768401 - 768838 | 16072.4 |
| sulfurtransferase | C5C18_03595 | Not Available | Negative | 768952 - 769854 | 32948.2 |
| cell division protein zape | C5C18_03600 | Not Available | Positive | 770066 - 771112 | 36890.9 |
| ammonium transporter | C5C18_03605 | Not Available | Positive | 771363 - 772643 | 43669.5 |
| growth inhibitor pemk | C5C18_03610 | Not Available | Positive | 772876 - 773298 | 15350.1 |
| sgnh/gdsl hydrolase family protein | C5C18_03615 | Not Available | Negative | 773385 - 774149 | 27586.6 |
| hypothetical protein | C5C18_03620 | Not Available | Negative | 774202 - 774708 | 18670.8 |
| hypothetical protein | C5C18_03625 | Not Available | Positive | 775129 - 777297 | 75044.0 |
| llm class flavin-dependent oxidoreductase | C5C18_03630 | Not Available | Positive | 777570 - 778445 | 31800.2 |
| 2', 3'-cyclic nucleotide 2'-phosphodiesterase | C5C18_03635 | Not Available | Positive | 778566 - 780029 | 51914.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |