Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dutp diphosphatase | C5C18_03540 | Not Available | Positive | 755191 - 755664 | 16422.5 |
| duf3710 domain-containing protein | C5C18_03545 | Not Available | Positive | 755661 - 756284 | 22057.1 |
| duf3159 domain-containing protein | C5C18_03550 | Not Available | Positive | 756290 - 757045 | 26244.3 |
| aconitate hydratase acna | C5C18_03555 | Not Available | Positive | 757234 - 760044 | 101110.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | C5C18_03560 | Not Available | Positive | 760164 - 762104 | 69497.8 |
| 3-hydroxyacyl-coa dehydrogenase | C5C18_03565 | Not Available | Negative | 762420 - 764543 | 76240.8 |
| acetyl-coa c-acyltransferase | C5C18_03570 | Not Available | Negative | 764547 - 765761 | 42775.1 |
| ribonuclease d | C5C18_03575 | Not Available | Negative | 765837 - 767036 | 43413.7 |
| duf3000 domain-containing protein | C5C18_03580 | Not Available | Negative | 767029 - 767628 | 21029.5 |
| pyrimidine reductase | C5C18_03585 | Not Available | Negative | 767700 - 768404 | 24322.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |