Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_00290 | Not Available | Negative | 57020 - 58339 | 44052.4 |
| duf1275 domain-containing protein | C5C18_00295 | Not Available | Positive | 58645 - 59307 | 21974.7 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | C5C18_00300 | Not Available | Negative | 59317 - 60231 | 32746.3 |
| ribonuclease iii | C5C18_00305 | Not Available | Negative | 60234 - 60986 | 26111.2 |
| 50s ribosomal protein l32 | C5C18_00310 | Not Available | Negative | 61015 - 61218 | 7501.14 |
| hypothetical protein | C5C18_00315 | Not Available | Negative | 61238 - 61783 | 19415.0 |
| tigr03842 family llm class f420-dependent oxidoreductase | C5C18_00320 | Not Available | Negative | 61922 - 62938 | 37310.2 |
| dihydropyrimidinase | C5C18_00325 | Not Available | Negative | 62984 - 64423 | 51678.4 |
| acyltransferase | C5C18_00330 | Not Available | Negative | 64449 - 65297 | 32155.0 |
| 2-phospho-l-lactate transferase | C5C18_00335 | Not Available | Positive | 65465 - 66451 | 34223.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |