Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 722040 - 722112 | Not Available |
| hypothetical protein | C5C18_03395 | Not Available | Negative | 722230 - 723279 | 36071.6 |
| abc transporter atp-binding protein | C5C18_03400 | Not Available | Positive | 723516 - 724592 | 38946.8 |
| duf4032 domain-containing protein | C5C18_03405 | Not Available | Positive | 724693 - 726009 | 49050.9 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | C5C18_03410 | Not Available | Negative | 726093 - 727112 | 35315.7 |
| cysteine--trna ligase | C5C18_03415 | Not Available | Negative | 727102 - 728550 | 53232.2 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | C5C18_03420 | Not Available | Negative | 728608 - 729822 | 41159.1 |
| card family transcriptional regulator | C5C18_03425 | Not Available | Negative | 729819 - 730301 | 17572.0 |
| hypothetical protein | C5C18_03430 | Not Available | Positive | 730462 - 731028 | 19211.6 |
| is3 family transposase | C5C18_03435 | Not Available | Positive | 731045 - 731424 | 14384.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |