Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain-containing protein | C5C18_03340 | Not Available | Negative | 714374 - 714754 | 13420.1 |
| hypothetical protein | C5C18_03345 | Not Available | Positive | 714875 - 715072 | 7012.21 |
| dna-binding response regulator | C5C18_03350 | Not Available | Positive | 715161 - 715850 | 25574.7 |
| sensor histidine kinase | C5C18_03355 | Not Available | Positive | 715921 - 717573 | 59279.1 |
| chaperonin groel | C5C18_03360 | Not Available | Negative | 717757 - 719379 | 56614.9 |
| cold-shock protein | C5C18_03365 | Not Available | Negative | 719559 - 719762 | 7143.34 |
| hypothetical protein | C5C18_03370 | Not Available | Negative | 719931 - 720473 | 18201.4 |
| duf3263 domain-containing protein | C5C18_03375 | Not Available | Negative | 720518 - 720799 | 10307.3 |
| peptide-methionine (r)-s-oxide reductase | C5C18_03380 | Not Available | Positive | 720992 - 721399 | 14974.2 |
| nitroreductase | C5C18_03385 | Not Available | Positive | 721402 - 721953 | 20015.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |