Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C5C18_03290 | Not Available | Positive | 704439 - 705314 | 32259.5 |
| abc transporter permease | C5C18_03295 | Not Available | Positive | 705311 - 706081 | 27248.7 |
| phosphoketolase | C5C18_03300 | Not Available | Positive | 706150 - 708624 | 91760.1 |
| hnh endonuclease | C5C18_03305 | Not Available | Negative | 708835 - 709332 | 18483.4 |
| hypothetical protein | C5C18_03310 | Not Available | Negative | 709332 - 709568 | 8121.85 |
| hypothetical protein | C5C18_03315 | Not Available | Negative | 709750 - 710454 | 23806.7 |
| metal-dependent transcriptional regulator | C5C18_03320 | Not Available | Negative | 710980 - 711672 | 25716.8 |
| phosphoserine transaminase | C5C18_03325 | Not Available | Positive | 711799 - 712917 | 40135.4 |
| duf2530 domain-containing protein | C5C18_03330 | Not Available | Positive | 712926 - 713153 | 7989.88 |
| duf3027 domain-containing protein | C5C18_03335 | Not Available | Negative | 713629 - 714381 | 27205.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |