Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase | C5C18_03190 | Not Available | Positive | 688392 - 688937 | 19584.2 |
| carbohydrate kinase | C5C18_03195 | Not Available | Positive | 689030 - 689941 | 30954.7 |
| voc family protein | C5C18_03200 | Not Available | Positive | 690033 - 690449 | 14496.0 |
| glucose-6-phosphate dehydrogenase (coenzyme-f420) | C5C18_03205 | Not Available | Positive | 690579 - 691601 | 37418.1 |
| 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit cofg | C5C18_03210 | Not Available | Positive | 691645 - 694035 | 86290.0 |
| alpha/beta hydrolase | C5C18_03215 | Not Available | Positive | 694032 - 694826 | 27815.7 |
| 4-hydroxyacetophenone monooxygenase | C5C18_03220 | Not Available | Positive | 694826 - 696271 | 52668.2 |
| duf4287 domain-containing protein | C5C18_03225 | Not Available | Positive | 696295 - 696540 | 8943.59 |
| marr family transcriptional regulator | C5C18_03230 | Not Available | Positive | 696680 - 697177 | 18168.8 |
| hypothetical protein | C5C18_03235 | Not Available | Positive | 697280 - 697525 | 8587.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |