Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_03035 | Not Available | Negative | 659835 - 660500 | 22984.8 |
| hypothetical protein | C5C18_03040 | Not Available | Negative | 660548 - 661654 | 37238.9 |
| hypothetical protein | C5C18_03045 | Not Available | Negative | 661657 - 662268 | 21129.4 |
| hypothetical protein | C5C18_03050 | Not Available | Negative | 662265 - 662630 | 12600.5 |
| ppox class f420-dependent enzyme | C5C18_03055 | Not Available | Positive | 662833 - 663219 | 13850.6 |
| hypothetical protein | C5C18_03060 | Not Available | Positive | 663224 - 664120 | 31130.6 |
| hypothetical protein | C5C18_03065 | Not Available | Negative | 664168 - 665373 | 40395.3 |
| hypothetical protein | C5C18_03070 | Not Available | Negative | 665528 - 666580 | 38089.0 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | C5C18_03075 | Not Available | Negative | 666577 - 667869 | 45499.4 |
| ornithine monooxygenase | C5C18_03080 | Not Available | Negative | 667866 - 669233 | 51068.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |