Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | C5C18_02935 | Not Available | Negative | 636521 - 638392 | 67678.0 |
| transcriptional regulator | C5C18_02940 | Not Available | Positive | 638431 - 639429 | 36016.8 |
| duf559 domain-containing protein | C5C18_02945 | Not Available | Negative | 639518 - 640411 | 32571.0 |
| xre family transcriptional regulator | C5C18_02950 | Not Available | Negative | 640529 - 642172 | 60565.0 |
| phosphoenolpyruvate carboxykinase (gtp) | C5C18_02955 | Not Available | Positive | 642213 - 644057 | 66956.8 |
| type ii 3-dehydroquinate dehydratase | C5C18_02960 | Not Available | Positive | 644146 - 644589 | 15499.5 |
| hypothetical protein | C5C18_02965 | Not Available | Negative | 644672 - 644980 | 11839.7 |
| hypothetical protein | C5C18_02970 | Not Available | Negative | 644981 - 645592 | 22754.1 |
| ribonuclease hi | C5C18_02975 | Not Available | Positive | 645975 - 646496 | 18761.0 |
| glycoside hydrolase 68 family protein | C5C18_02980 | Not Available | Positive | 646555 - 648267 | 62720.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |