Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yihy/virulence factor brkb family protein | C5C18_02880 | Not Available | Positive | 625162 - 626283 | 39671.9 |
| deor/glpr transcriptional regulator | C5C18_02885 | Not Available | Positive | 626463 - 627224 | 26725.2 |
| 1-phosphofructokinase | C5C18_02890 | Not Available | Positive | 627221 - 628180 | 32304.2 |
| pts fructose transporter subunit iia | C5C18_02895 | Not Available | Positive | 628177 - 628629 | 15324.3 |
| pts fructose transporter subunit iibc | C5C18_02905 | Not Available | Positive | 629010 - 630443 | 48604.3 |
| exodeoxyribonuclease iii | C5C18_02910 | Not Available | Positive | 631007 - 631843 | 30718.8 |
| tryptophan--trna ligase | C5C18_02915 | Not Available | Positive | 631891 - 632916 | 37333.3 |
| had family hydrolase | C5C18_02920 | Not Available | Positive | 632855 - 633655 | 28242.3 |
| glycerol kinase | C5C18_02925 | Not Available | Negative | 634004 - 635518 | 54946.6 |
| aquaporin family protein | C5C18_02930 | Not Available | Negative | 635565 - 636323 | 25383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |