Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-grasp domain-containing protein | C5C18_02780 | Not Available | Positive | 602690 - 604456 | 61834.2 |
| nad(p)h-quinone dehydrogenase | C5C18_02785 | Not Available | Negative | 604474 - 605910 | 49954.9 |
| purine-nucleoside phosphorylase | C5C18_02790 | Not Available | Positive | 606016 - 606849 | 28962.5 |
| phosphomannomutase | C5C18_02795 | Not Available | Positive | 606846 - 608513 | 57968.6 |
| pts ascorbate transporter subunit iib | C5C18_02800 | Not Available | Negative | 608546 - 608818 | 9480.47 |
| pts ascorbate transporter subunit iia | C5C18_02805 | Not Available | Negative | 608815 - 609300 | 16705.8 |
| adenosine deaminase | C5C18_02810 | Not Available | Negative | 609303 - 610424 | 40520.6 |
| thymidine phosphorylase | C5C18_02815 | Not Available | Negative | 610643 - 611950 | 45883.9 |
| cytidine deaminase | C5C18_02820 | Not Available | Negative | 611987 - 612391 | 14057.0 |
| abc transporter permease | C5C18_02825 | Not Available | Negative | 612403 - 613668 | 43729.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |