Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtra family protein | C5C18_02680 | Not Available | Positive | 581005 - 581517 | 18763.1 |
| glycosyltransferase family 2 protein | C5C18_02685 | Not Available | Positive | 581534 - 582478 | 34117.7 |
| dtdp-4-keto-6-deoxy-d-glucose epimerase | C5C18_02690 | Not Available | Negative | 582496 - 583104 | 22524.5 |
| dtdp-4-dehydrorhamnose reductase | C5C18_02695 | Not Available | Positive | 583202 - 584047 | 29912.0 |
| glycosyltransferase family 1 protein | C5C18_02700 | Not Available | Positive | 584077 - 585180 | 39149.9 |
| hypothetical protein | C5C18_02705 | Not Available | Negative | 585229 - 585750 | 18869.4 |
| hypothetical protein | C5C18_02710 | Not Available | Negative | 585863 - 587923 | 72556.9 |
| lytr family transcriptional regulator | C5C18_02715 | Not Available | Negative | 588130 - 589440 | 47312.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | C5C18_02720 | Not Available | Negative | 589491 - 589958 | 15728.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | C5C18_02725 | Not Available | Negative | 590071 - 591189 | 39586.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |