Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| whib family transcriptional regulator | C5C18_02580 | Not Available | Negative | 558340 - 558672 | 12275.4 |
| udp-glucose 4-epimerase gale | C5C18_02585 | Not Available | Negative | 558843 - 559808 | 34194.3 |
| mannose-6-phosphate isomerase, class i | C5C18_02590 | Not Available | Negative | 559979 - 561196 | 42090.0 |
| acyl-coa dehydrogenase | C5C18_02595 | Not Available | Positive | 561436 - 562623 | 42859.0 |
| exopolysaccharide production protein | C5C18_02600 | Not Available | Positive | 562710 - 564059 | 47677.4 |
| exopolysaccharide production protein | C5C18_02605 | Not Available | Positive | 564056 - 565336 | 45974.2 |
| glycosyltransferase family 1 protein | C5C18_02610 | Not Available | Negative | 565343 - 566443 | 40519.0 |
| gdp-mannose 4,6 dehydratase | C5C18_02615 | Not Available | Positive | 566567 - 567550 | 36463.6 |
| gdp-mannose 4,6 dehydratase | C5C18_02620 | Not Available | Positive | 567553 - 568512 | 34081.0 |
| glycosyltransferase family 1 protein | C5C18_02625 | Not Available | Negative | 568593 - 570092 | 54007.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |