Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| whib family transcriptional regulator | C5C18_02480 | Not Available | Positive | 533977 - 534225 | 8987.61 |
| atpase | C5C18_02485 | Not Available | Negative | 534303 - 535802 | 54376.5 |
| 3-hydroxyacyl-coa dehydrogenase | C5C18_02490 | Not Available | Positive | 536062 - 536481 | 15439.7 |
| preprotein translocase subunit seca | C5C18_02495 | Not Available | Negative | 536868 - 539669 | 103580.0 |
| ribosome-associated translation inhibitor raia | C5C18_02500 | Not Available | Negative | 539866 - 540549 | 24725.0 |
| hypothetical protein | C5C18_02505 | Not Available | Negative | 540601 - 541323 | 24215.4 |
| hypothetical protein | C5C18_02510 | Not Available | Negative | 541462 - 543168 | 58687.0 |
| sensor histidine kinase | C5C18_02515 | Not Available | Negative | 543165 - 544829 | 60299.9 |
| dna-binding response regulator | C5C18_02520 | Not Available | Negative | 544826 - 545512 | 24735.0 |
| hypothetical protein | C5C18_02525 | Not Available | Positive | 545930 - 546931 | 34766.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |