Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C5C18_02430 | Not Available | Negative | 516469 - 517989 | 54895.0 |
| abc transporter substrate-binding protein | C5C18_02435 | Not Available | Negative | 518100 - 519236 | 39748.3 |
| k(+)-transporting atpase subunit f | C5C18_02440 | Not Available | Positive | 519765 - 519854 | 3097.04 |
| potassium-transporting atpase subunit kdpa | C5C18_02445 | Not Available | Positive | 519854 - 521533 | 57517.1 |
| k(+)-transporting atpase subunit b | C5C18_02450 | Not Available | Positive | 521530 - 523683 | 73629.7 |
| type iv secretion protein rhs | C5C18_02455 | Not Available | Negative | 524278 - 529563 | 188569.0 |
| pyrophosphorylase | C5C18_02460 | Not Available | Negative | 529647 - 529928 | 10005.6 |
| serine/threonine protein kinase | C5C18_02465 | Not Available | Negative | 530081 - 532012 | 66006.2 |
| aldo/keto reductase | C5C18_02470 | Not Available | Negative | 532107 - 533084 | 36132.4 |
| hypothetical protein | C5C18_02475 | Not Available | Negative | 533160 - 533591 | 14689.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |