Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | C5C18_02380 | Not Available | Negative | 505050 - 506504 | 50313.1 |
| cell division protein ftsw | C5C18_02385 | Not Available | Negative | 506512 - 507894 | 48695.8 |
| stp1/irep family pp2c-type ser/thr phosphatase | C5C18_02390 | Not Available | Negative | 507891 - 509144 | 45240.2 |
| fha domain-containing protein | C5C18_02395 | Not Available | Negative | 509187 - 509774 | 20977.1 |
| duf2662 domain-containing protein | C5C18_02400 | Not Available | Negative | 509771 - 510514 | 26547.5 |
| Trna-leu | Not Available | Not Available | Positive | 510868 - 510954 | Not Available |
| imma/irre family metallo-endopeptidase | C5C18_02410 | Not Available | Positive | 511864 - 513309 | 53047.1 |
| nitroreductase family deazaflavin-dependent oxidoreductase | C5C18_02415 | Not Available | Negative | 513440 - 513850 | 14742.2 |
| transcriptional regulator | C5C18_02420 | Not Available | Negative | 513885 - 515120 | 42390.1 |
| sugar abc transporter permease | C5C18_02425 | Not Available | Negative | 515243 - 516472 | 42357.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |