Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_02330 | Not Available | Negative | 494721 - 495281 | 20131.8 |
| peptidylprolyl isomerase | C5C18_02335 | Not Available | Positive | 495416 - 495955 | 19288.8 |
| rhomboid family intramembrane serine protease | C5C18_02340 | Not Available | Positive | 496029 - 496907 | 31520.3 |
| putative protein n(5)-glutamine methyltransferase | C5C18_02345 | Not Available | Negative | 497230 - 497991 | 26792.3 |
| septation inhibitor protein | C5C18_02350 | Not Available | Negative | 498047 - 498289 | 8989.16 |
| class e sortase | C5C18_02355 | Not Available | Positive | 498474 - 499253 | 27970.8 |
| aminodeoxychorismate/anthranilate synthase component ii | C5C18_02360 | Not Available | Positive | 499411 - 500058 | 22934.4 |
| arac family transcriptional regulator | C5C18_02365 | Not Available | Positive | 500378 - 501367 | 35163.9 |
| stk1 family pasta domain-containing ser/thr kinase | C5C18_02370 | Not Available | Negative | 501481 - 503184 | 60120.2 |
| serine/threonine protein kinase | C5C18_02375 | Not Available | Negative | 503284 - 505053 | 60372.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |