Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein recf | C5C18_02280 | Not Available | Positive | 485807 - 486985 | 42676.8 |
| duf721 domain-containing protein | C5C18_02285 | Not Available | Positive | 486978 - 487487 | 18265.7 |
| dna topoisomerase (atp-hydrolyzing) subunit b | C5C18_02290 | Not Available | Positive | 487665 - 489734 | 75581.7 |
| dna gyrase subunit a | C5C18_02295 | Not Available | Positive | 489977 - 492577 | 95687.9 |
| hypothetical protein | C5C18_02300 | Not Available | Positive | 492570 - 492980 | 14485.2 |
| Trna-ile | Not Available | Not Available | Positive | 493041 - 493117 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 493192 - 493264 | Not Available |
| hypothetical protein | C5C18_02315 | Not Available | Negative | 493372 - 493890 | 17934.3 |
| thioredoxin | C5C18_02320 | Not Available | Negative | 493910 - 494176 | 9256.01 |
| dna mismatch repair protein mutt | C5C18_02325 | Not Available | Negative | 494221 - 494649 | 15528.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |