Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | C5C18_02180 | Not Available | Negative | 464996 - 465574 | 19742.6 |
| 30s ribosomal protein s6 | C5C18_02185 | Not Available | Negative | 465580 - 465957 | 13660.4 |
| cca trna nucleotidyltransferase | C5C18_02190 | Not Available | Negative | 466128 - 467552 | 52523.6 |
| hypothetical protein | C5C18_02195 | Not Available | Positive | 467700 - 469901 | 75822.6 |
| murein biosynthesis integral membrane protein murj | C5C18_02200 | Not Available | Positive | 469894 - 471510 | 56633.8 |
| thioredoxin-disulfide reductase | C5C18_02205 | Not Available | Positive | 471720 - 472694 | 34262.3 |
| thioredoxin | C5C18_02210 | Not Available | Positive | 472753 - 473076 | 11655.0 |
| gntr family transcriptional regulator | C5C18_02215 | Not Available | Positive | 473297 - 474601 | 47553.9 |
| d-alanine--d-alanine ligase | C5C18_02220 | Not Available | Positive | 474632 - 475597 | 34198.9 |
| chromosome partitioning protein parb | C5C18_02225 | Not Available | Negative | 475959 - 476927 | 34812.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |