Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_02130 | Not Available | Negative | 456666 - 457049 | 13816.3 |
| hypothetical protein | C5C18_02135 | Not Available | Positive | 457422 - 457772 | 11648.4 |
| hypothetical protein | C5C18_02140 | Not Available | Negative | 457806 - 458612 | 28592.6 |
| transcriptional regulator | C5C18_02145 | Not Available | Positive | 459018 - 459731 | 25240.3 |
| llm class f420-dependent oxidoreductase | C5C18_02150 | Not Available | Negative | 459832 - 460704 | 31587.0 |
| rna-binding s4 domain-containing protein | C5C18_02155 | Not Available | Negative | 460827 - 461051 | 7648.1 |
| fic family protein | C5C18_02160 | Not Available | Negative | 461048 - 462247 | 45274.9 |
| replicative dna helicase | C5C18_02165 | Not Available | Negative | 462359 - 463732 | 49595.2 |
| 50s ribosomal protein l9 | C5C18_02170 | Not Available | Negative | 464176 - 464628 | 16162.5 |
| 30s ribosomal protein s18 | C5C18_02175 | Not Available | Negative | 464637 - 464897 | 9363.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |