Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_02020 | Not Available | Positive | 429423 - 430217 | 28546.3 |
| laci family transcriptional regulator | C5C18_02025 | Not Available | Negative | 430395 - 431420 | 35321.8 |
| carbohydrate abc transporter permease | C5C18_02030 | Not Available | Negative | 431630 - 432493 | 30684.2 |
| abc transporter permease | C5C18_02035 | Not Available | Negative | 432490 - 433596 | 40443.3 |
| carbohydrate abc transporter substrate-binding protein | C5C18_02040 | Not Available | Negative | 433712 - 435022 | 45940.6 |
| hypothetical protein | C5C18_02050 | Not Available | Negative | 437358 - 438575 | 45067.8 |
| hypothetical protein | C5C18_02055 | Not Available | Negative | 438842 - 439123 | 10265.3 |
| glucose-6-phosphate dehydrogenase | C5C18_02060 | Not Available | Negative | 439412 - 440806 | 49898.4 |
| hypothetical protein | C5C18_02065 | Not Available | Negative | 440937 - 441809 | 30947.5 |
| hypothetical protein | C5C18_02070 | Not Available | Positive | 442060 - 443388 | 46770.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |