Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | C5C18_01970 | Not Available | Positive | 421983 - 422333 | 13018.3 |
| hypothetical protein | C5C18_01975 | Not Available | Positive | 422493 - 423080 | 21312.1 |
| hypothetical protein | C5C18_01980 | Not Available | Negative | 423119 - 423382 | 9442.0 |
| hypothetical protein | C5C18_01985 | Not Available | Positive | 423887 - 424705 | 28762.8 |
| hypothetical protein | C5C18_01990 | Not Available | Negative | 424710 - 425099 | 13221.7 |
| hypothetical protein | C5C18_01995 | Not Available | Negative | 425075 - 425293 | 7757.21 |
| nad(p)/fad-dependent oxidoreductase | C5C18_02000 | Not Available | Positive | 425408 - 426859 | 51294.0 |
| glyoxalase | C5C18_02005 | Not Available | Positive | 426972 - 427394 | 15110.7 |
| asp23/gls24 family envelope stress response protein | C5C18_02010 | Not Available | Negative | 427457 - 428287 | 28354.9 |
| hypothetical protein | C5C18_02015 | Not Available | Negative | 428427 - 429086 | 23760.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |