Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class f420-dependent oxidoreductase | C5C18_00140 | Not Available | Negative | 23020 - 23847 | 30211.6 |
| meta domain-containing protein | C5C18_00145 | Not Available | Negative | 23911 - 24360 | 14657.1 |
| signal recognition particle protein | C5C18_00150 | Not Available | Negative | 24357 - 25913 | 55045.4 |
| lipoate--protein ligase b | C5C18_00155 | Not Available | Positive | 26045 - 26701 | 23431.9 |
| lipoyl synthase | C5C18_00160 | Not Available | Positive | 26698 - 27684 | 36992.9 |
| signal recognition particle-docking protein ftsy | C5C18_00165 | Not Available | Negative | 27803 - 28678 | 31683.0 |
| chromosome segregation protein smc | C5C18_00170 | Not Available | Negative | 28849 - 32352 | 125541.0 |
| adenylyltransferase/sulfurtransferase moez | C5C18_00175 | Not Available | Positive | 32682 - 33659 | 33308.7 |
| molybdopterin synthase sulfur carrier subunit | C5C18_00180 | Not Available | Negative | 33686 - 33928 | 8030.6 |
| gtp 3',8-cyclase moaa | C5C18_00185 | Not Available | Negative | 33925 - 35007 | 38887.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |