Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_01920 | Not Available | Positive | 411530 - 414457 | 100387.0 |
| m18 family aminopeptidase | C5C18_01925 | Not Available | Positive | 414781 - 416058 | 45109.3 |
| aminoacyl-trna hydrolase | C5C18_01930 | Not Available | Negative | 416164 - 416586 | 15527.6 |
| hypothetical protein | C5C18_01935 | Not Available | Positive | 417044 - 417286 | 8630.76 |
| hypothetical protein | C5C18_01940 | Not Available | Negative | 417390 - 417857 | 17238.3 |
| marr family transcriptional regulator | C5C18_01945 | Not Available | Negative | 417972 - 418433 | 16574.3 |
| voc family protein | C5C18_01950 | Not Available | Positive | 418495 - 418863 | 12964.2 |
| acetyl esterase | C5C18_01955 | Not Available | Negative | 418879 - 419799 | 32143.8 |
| caax protease | C5C18_01960 | Not Available | Positive | 420180 - 421010 | 31103.1 |
| sam-dependent methyltransferase | C5C18_01965 | Not Available | Negative | 421161 - 421787 | 22031.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |