Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_01870 | Not Available | Positive | 401471 - 402367 | 31633.8 |
| kr domain-containing protein | C5C18_01875 | Not Available | Negative | 402480 - 403160 | 23534.8 |
| hypothetical protein | C5C18_01880 | Not Available | Negative | 403226 - 404248 | 34681.9 |
| marr family transcriptional regulator | C5C18_01885 | Not Available | Negative | 404633 - 405859 | 41706.4 |
| sugar abc transporter substrate-binding protein | C5C18_01890 | Not Available | Positive | 406184 - 407476 | 45935.9 |
| sugar abc transporter permease | C5C18_01895 | Not Available | Positive | 407481 - 408401 | 33564.0 |
| abc transporter permease | C5C18_01900 | Not Available | Positive | 408398 - 409291 | 32751.2 |
| hypothetical protein | C5C18_01905 | Not Available | Negative | 409201 - 409401 | 7227.71 |
| atp-binding protein | C5C18_01910 | Not Available | Positive | 409373 - 410554 | 42287.2 |
| hypothetical protein | C5C18_01915 | Not Available | Negative | 410575 - 411303 | 25462.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |