Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone | C5C18_01820 | Not Available | Negative | 392796 - 393173 | 13251.8 |
| hypothetical protein | C5C18_01825 | Not Available | Positive | 393802 - 394638 | 27912.5 |
| hypothetical protein | C5C18_01830 | Not Available | Negative | 394718 - 395185 | 15269.7 |
| oxidoreductase | C5C18_01835 | Not Available | Positive | 395499 - 396284 | 27671.8 |
| hypothetical protein | C5C18_01840 | Not Available | Negative | 396317 - 396700 | 13119.6 |
| amp-dependent synthetase | C5C18_01845 | Not Available | Positive | 397103 - 398782 | 61602.5 |
| class i sam-dependent methyltransferase | C5C18_01850 | Not Available | Negative | 398891 - 399481 | 20850.0 |
| hypothetical protein | C5C18_01855 | Not Available | Negative | 399582 - 399968 | 14290.5 |
| hypothetical protein | C5C18_01860 | Not Available | Positive | 400305 - 400904 | 19344.9 |
| hypothetical protein | C5C18_01865 | Not Available | Positive | 400904 - 401365 | 16900.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |