Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_01715 | Not Available | Negative | 370310 - 370651 | 12279.3 |
| dinb family protein | C5C18_01720 | Not Available | Negative | 370927 - 371511 | 21823.9 |
| glycosyl hydrolase | C5C18_01725 | Not Available | Negative | 371638 - 373896 | 78704.4 |
| carbohydrate abc transporter permease | C5C18_01730 | Not Available | Negative | 374099 - 374995 | 31905.9 |
| sugar abc transporter permease | C5C18_01735 | Not Available | Negative | 374992 - 375999 | 36647.4 |
| sugar abc transporter substrate-binding protein | C5C18_01740 | Not Available | Negative | 376005 - 377291 | 44605.8 |
| laci family dna-binding transcriptional regulator | C5C18_01745 | Not Available | Positive | 377444 - 378442 | 34982.0 |
| beta-ketoacyl-acp reductase | C5C18_01750 | Not Available | Negative | 379736 - 380704 | 33772.7 |
| glycosyl transferase | C5C18_01755 | Not Available | Positive | 380838 - 381599 | 28206.8 |
| nad(p)-dependent oxidoreductase | C5C18_01760 | Not Available | Positive | 381589 - 382584 | 36401.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |