Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | C5C18_01665 | Not Available | Positive | 358934 - 361060 | 74789.3 |
| cation transporter | C5C18_01670 | Not Available | Positive | 361126 - 362025 | 30883.0 |
| duf808 domain-containing protein | C5C18_01675 | Not Available | Negative | 362118 - 363008 | 30969.7 |
| hypothetical protein | C5C18_01680 | Not Available | Positive | 363422 - 364789 | 48420.2 |
| hypothetical protein | C5C18_01685 | Not Available | Negative | 365013 - 365783 | 26476.7 |
| laci family transcriptional regulator | C5C18_01690 | Not Available | Negative | 366254 - 367300 | 37263.1 |
| duf4440 domain-containing protein | C5C18_01695 | Not Available | Negative | 367647 - 368090 | 15938.5 |
| atp-dependent dna ligase | C5C18_01700 | Not Available | Positive | 368586 - 368921 | 12191.5 |
| hypothetical protein | C5C18_01705 | Not Available | Positive | 368929 - 369300 | 12508.7 |
| arac family transcriptional regulator | C5C18_01710 | Not Available | Positive | 369313 - 370305 | 36511.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |