Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | C5C18_01455 | Not Available | Positive | 304932 - 306506 | 56367.8 |
| abc transporter permease | C5C18_01460 | Not Available | Positive | 306503 - 307579 | 36344.5 |
| sugar abc transporter permease | C5C18_01465 | Not Available | Positive | 307576 - 308616 | 35915.2 |
| beta-xylosidase | C5C18_01470 | Not Available | Positive | 309205 - 313776 | 157714.0 |
| hypothetical protein | C5C18_01475 | Not Available | Positive | 313851 - 314474 | 20769.9 |
| duf916 domain-containing protein | C5C18_01480 | Not Available | Positive | 314586 - 315644 | 36165.9 |
| mfs transporter | C5C18_01485 | Not Available | Positive | 315720 - 317114 | 48856.4 |
| hypothetical protein | C5C18_01490 | Not Available | Negative | 317218 - 317784 | 20704.7 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | C5C18_01495 | Not Available | Positive | 318399 - 318647 | 9211.88 |
| txe/yoeb family addiction module toxin | C5C18_01500 | Not Available | Positive | 318644 - 318910 | 10424.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |