Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | C5C18_00090 | Not Available | Negative | 15839 - 16654 | 29312.7 |
| 50s ribosomal protein l19 | C5C18_00095 | Not Available | Negative | 16780 - 17127 | 13010.8 |
| hypothetical protein | C5C18_00100 | Not Available | Negative | 17314 - 17799 | 17051.9 |
| type i methionyl aminopeptidase | C5C18_00105 | Not Available | Positive | 17858 - 18625 | 27002.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | C5C18_00110 | Not Available | Negative | 18748 - 19431 | 24975.8 |
| ribosome maturation factor rimm | C5C18_00115 | Not Available | Negative | 19428 - 20087 | 23732.1 |
| kh domain-containing protein | C5C18_00120 | Not Available | Negative | 20090 - 20326 | 8406.19 |
| 30s ribosomal protein s16 | C5C18_00125 | Not Available | Negative | 20330 - 20740 | 14945.9 |
| glutamate--cysteine ligase | C5C18_00130 | Not Available | Positive | 21066 - 22211 | 42479.4 |
| sgnh/gdsl hydrolase family protein | C5C18_00135 | Not Available | Positive | 22208 - 22978 | 25781.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |