Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | C5C18_01405 | Not Available | Positive | 293623 - 294603 | 35786.4 |
| abc transporter permease | C5C18_01410 | Not Available | Positive | 294600 - 295406 | 28580.3 |
| abc transporter | C5C18_01415 | Not Available | Positive | 295403 - 296200 | 28798.9 |
| hypothetical protein | C5C18_01420 | Not Available | Positive | 296229 - 296882 | 22779.4 |
| hypothetical protein | C5C18_01425 | Not Available | Negative | 297385 - 297966 | 20621.4 |
| transcriptional regulator | C5C18_01430 | Not Available | Positive | 298249 - 299250 | 36383.6 |
| sugar abc transporter atp-binding protein | C5C18_01435 | Not Available | Positive | 299404 - 300921 | 55158.2 |
| thiamine pyrophosphate-binding protein | C5C18_01440 | Not Available | Positive | 301091 - 302737 | 56738.2 |
| hypothetical protein | C5C18_01445 | Not Available | Positive | 302842 - 303546 | 24767.0 |
| sugar abc transporter substrate-binding protein | C5C18_01450 | Not Available | Positive | 303785 - 304786 | 34889.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |