Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | C5C18_01355 | Not Available | Positive | 280342 - 281340 | 35430.2 |
| hypothetical protein | C5C18_01360 | Not Available | Negative | 281335 - 284580 | 114916.0 |
| non-ribosomal peptide synthetase | C5C18_01365 | Not Available | Positive | 284687 - 287305 | 93433.9 |
| hypothetical protein | C5C18_01370 | Not Available | Positive | 287387 - 288289 | 33234.5 |
| hypothetical protein | C5C18_01375 | Not Available | Positive | 288291 - 289577 | 45605.3 |
| chloramphenicol phosphotransferase | C5C18_01380 | Not Available | Positive | 289586 - 290137 | 19378.8 |
| mbth family protein | C5C18_01385 | Not Available | Positive | 290134 - 290337 | 7288.34 |
| cytochrome p450 | C5C18_01390 | Not Available | Positive | 290370 - 291524 | 42511.8 |
| had family phosphatase | C5C18_01395 | Not Available | Positive | 291524 - 292333 | 27616.6 |
| carboxylase | C5C18_01400 | Not Available | Negative | 292322 - 293563 | 42971.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |