Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | C5C18_01300 | Not Available | Positive | 270288 - 270917 | 22868.8 |
| hydroxymethylglutaryl-coa lyase | C5C18_01305 | Not Available | Negative | 271004 - 271930 | 31789.8 |
| formyl-coa transferase | C5C18_01310 | Not Available | Negative | 271927 - 273162 | 43539.8 |
| glutathionylspermidine synthase | C5C18_01315 | Not Available | Positive | 273255 - 274634 | 50955.5 |
| mfs transporter | C5C18_01325 | Not Available | Negative | 275475 - 277094 | 56270.9 |
| glyoxalase/bleomycin resistance/dioxygenase family protein | C5C18_01330 | Not Available | Negative | 277087 - 277452 | 13013.3 |
| alpha/beta hydrolase | C5C18_01335 | Not Available | Negative | 277455 - 278339 | 30455.5 |
| hypothetical protein | C5C18_01340 | Not Available | Negative | 278641 - 279495 | 32516.1 |
| hypothetical protein | C5C18_01345 | Not Available | Negative | 279452 - 279802 | 12341.5 |
| hypothetical protein | C5C18_01350 | Not Available | Positive | 280002 - 280253 | 9133.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |