Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | C5C18_01250 | Not Available | Positive | 258810 - 259805 | 34279.4 |
| abc transporter permease | C5C18_01255 | Not Available | Negative | 259827 - 260564 | 26345.5 |
| abc transporter permease | C5C18_01260 | Not Available | Negative | 260699 - 261616 | 33047.8 |
| spermidine/putrescine abc transporter atp-binding protein | C5C18_01265 | Not Available | Negative | 261619 - 262818 | 42657.4 |
| polyamine abc transporter substrate-binding protein | C5C18_01270 | Not Available | Negative | 262818 - 264044 | 44726.3 |
| hypothetical protein | C5C18_01275 | Not Available | Negative | 264230 - 264619 | 13837.5 |
| serine/threonine-protein phosphatase | C5C18_01280 | Not Available | Negative | 264929 - 265753 | 28298.2 |
| na+/h+ antiporter nhaa | C5C18_01285 | Not Available | Negative | 266099 - 267364 | 43672.9 |
| pyridine nucleotide-disulfide oxidoreductase | C5C18_01290 | Not Available | Positive | 267805 - 269061 | 45320.2 |
| zn-dependent oxidoreductase | C5C18_01295 | Not Available | Negative | 269151 - 270266 | 38937.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |