Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_01150 | Not Available | Negative | 236319 - 236687 | 13257.8 |
| trna pseudouridine(55) synthase trub | C5C18_01155 | Not Available | Negative | 236684 - 237631 | 32691.1 |
| 2-dehydropantoate 2-reductase | C5C18_01160 | Not Available | Positive | 237715 - 238713 | 34518.7 |
| hypothetical protein | C5C18_01165 | Not Available | Negative | 238760 - 239329 | 21030.8 |
| a/g-specific adenine glycosylase | C5C18_01170 | Not Available | Positive | 239396 - 240277 | 31281.4 |
| 30s ribosome-binding factor rbfa | C5C18_01175 | Not Available | Negative | 240619 - 241056 | 15884.6 |
| translation initiation factor if-2 | C5C18_01180 | Not Available | Negative | 241358 - 244243 | 99331.6 |
| duf448 domain-containing protein | C5C18_01185 | Not Available | Negative | 244342 - 244665 | 11785.0 |
| transcription termination/antitermination protein nusa | C5C18_01190 | Not Available | Negative | 244717 - 245718 | 36012.0 |
| hypothetical protein | C5C18_01195 | Not Available | Negative | 245964 - 246953 | 33638.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |