Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | C5C18_01100 | Not Available | Positive | 226484 - 227926 | 50770.3 |
| helicase | C5C18_01105 | Not Available | Negative | 227949 - 230105 | 78535.8 |
| hypothetical protein | C5C18_01110 | Not Available | Negative | 230344 - 230643 | 10335.1 |
| metal-sensitive transcriptional regulator | C5C18_01115 | Not Available | Positive | 230770 - 231048 | 10433.7 |
| homocysteine s-methyltransferase | C5C18_01120 | Not Available | Positive | 231045 - 231932 | 30139.6 |
| o-acetyl-adp-ribose deacetylase | C5C18_01125 | Not Available | Positive | 231929 - 232450 | 17659.9 |
| hypothetical protein | C5C18_01130 | Not Available | Negative | 232496 - 233104 | 22297.5 |
| duf2867 domain-containing protein | C5C18_01135 | Not Available | Negative | 233176 - 234723 | 56151.3 |
| bifunctional riboflavin kinase/fad synthetase | C5C18_01140 | Not Available | Negative | 234785 - 235750 | 34739.6 |
| hypothetical protein | C5C18_01145 | Not Available | Negative | 235750 - 236163 | 14609.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |