Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptidase b | C5C18_01050 | Not Available | Positive | 214088 - 216208 | 78351.0 |
| phosphotransferase | C5C18_01055 | Not Available | Positive | 216308 - 217681 | 49011.3 |
| hypothetical protein | C5C18_01060 | Not Available | Positive | 217683 - 217862 | 5949.36 |
| hypothetical protein | C5C18_01065 | Not Available | Negative | 217927 - 218493 | 20561.5 |
| hypothetical protein | C5C18_01070 | Not Available | Negative | 218513 - 219274 | 27931.4 |
| magnesium and cobalt transport protein cora | C5C18_01075 | Not Available | Negative | 219297 - 220430 | 42199.6 |
| exonuclease sbccd subunit d | C5C18_01080 | Not Available | Positive | 220565 - 221713 | 40775.3 |
| smc family atpase | C5C18_01085 | Not Available | Positive | 221710 - 224637 | 104311.0 |
| hydroxyethylthiazole kinase | C5C18_01090 | Not Available | Positive | 224854 - 225717 | 27965.6 |
| thiamine phosphate synthase | C5C18_01095 | Not Available | Positive | 225714 - 226358 | 21189.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |