Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C5C18_00040 | Not Available | Negative | 5772 - 7253 | 51839.6 |
| tyrosine recombinase xerc | C5C18_00050 | Not Available | Negative | 8062 - 8976 | 32947.6 |
| phosphodiesterase | C5C18_00055 | Not Available | Negative | 8973 - 9911 | 33147.5 |
| dna-protecting protein dpra | C5C18_00060 | Not Available | Negative | 9981 - 11330 | 45602.2 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 12636 - 12732 | Not Available |
| mg chelatase-like protein | C5C18_00065 | Not Available | Negative | 11327 - 12862 | 52849.8 |
| yran family protein | C5C18_00070 | Not Available | Negative | 12862 - 13215 | 13225.8 |
| cutinase family protein | C5C18_00075 | Not Available | Negative | 13471 - 14325 | 29799.8 |
| duf2469 domain-containing protein | C5C18_00080 | Not Available | Negative | 14801 - 15124 | 13327.4 |
| ribonuclease hii | C5C18_00085 | Not Available | Negative | 15137 - 15838 | 24688.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |