Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | C5C18_00900 | Not Available | Positive | 180087 - 182549 | 85668.2 |
| aminodeoxychorismate lyase | C5C18_00905 | Not Available | Positive | 182653 - 183486 | 28807.4 |
| 2-phospho-l-lactate guanylyltransferase | C5C18_00910 | Not Available | Negative | 183497 - 184108 | 20216.4 |
| coenzyme f420-0:l-glutamate ligase | C5C18_00915 | Not Available | Negative | 184105 - 184881 | 26232.4 |
| pantetheine-phosphate adenylyltransferase | C5C18_00920 | Not Available | Negative | 184966 - 185448 | 16901.7 |
| atp-dependent dna helicase recg | C5C18_00925 | Not Available | Negative | 185476 - 187641 | 77159.6 |
| hypothetical protein | C5C18_00930 | Not Available | Negative | 187652 - 189913 | 77360.1 |
| duf58 domain-containing protein | C5C18_00935 | Not Available | Negative | 189877 - 191172 | 45855.2 |
| atpase | C5C18_00940 | Not Available | Negative | 191162 - 192193 | 36853.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | C5C18_00945 | Not Available | Positive | 192312 - 192911 | 20908.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |