Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | C5C18_00745 | Not Available | Negative | 150428 - 151432 | 36707.0 |
| cytochrome ubiquinol oxidase subunit i | C5C18_00750 | Not Available | Negative | 151443 - 152852 | 51968.7 |
| acyltransferase | C5C18_00755 | Not Available | Negative | 153217 - 154266 | 38444.1 |
| hypothetical protein | C5C18_00760 | Not Available | Positive | 154480 - 155259 | 27196.2 |
| deda family protein | C5C18_00770 | Not Available | Positive | 157893 - 158531 | 22961.6 |
| glycine/betaine abc transporter | C5C18_00775 | Not Available | Negative | 158561 - 159490 | 32029.0 |
| abc transporter permease | C5C18_00780 | Not Available | Negative | 159493 - 160245 | 25653.2 |
| abc transporter permease | C5C18_00785 | Not Available | Negative | 160242 - 160928 | 24282.4 |
| abc transporter atp-binding protein | C5C18_00790 | Not Available | Negative | 160925 - 161755 | 29899.0 |
| hypothetical protein | C5C18_00795 | Not Available | Negative | 162005 - 162460 | 16024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |