Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | C5C18_00645 | Not Available | Negative | 124567 - 125313 | 26007.2 |
| molecular chaperone dnaj | C5C18_00650 | Not Available | Negative | 125317 - 126426 | 39879.2 |
| heat-inducible transcriptional repressor hrca | C5C18_00655 | Not Available | Negative | 126508 - 127530 | 37143.8 |
| duf4870 domain-containing protein | C5C18_00660 | Not Available | Positive | 127828 - 128202 | 13462.8 |
| coproporphyrinogen iii oxidase | C5C18_00665 | Not Available | Negative | 128222 - 129448 | 43847.6 |
| duf1990 domain-containing protein | C5C18_00670 | Not Available | Negative | 129450 - 130097 | 23394.8 |
| cell wall-binding repeat-containing protein | C5C18_00675 | Not Available | Negative | 130289 - 132160 | 62801.0 |
| elongation factor 4 | C5C18_00680 | Not Available | Negative | 132358 - 134208 | 67323.5 |
| 30s ribosomal protein s20 | C5C18_00685 | Not Available | Positive | 134480 - 134740 | 9080.07 |
| dna polymerase iii subunit delta | C5C18_00690 | Not Available | Negative | 134993 - 136021 | 35876.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |