Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter permease | C5C18_00535 | Not Available | Negative | 102046 - 103101 | 36999.5 |
| abc transporter permease | C5C18_00540 | Not Available | Negative | 103104 - 104183 | 38631.9 |
| peptide abc transporter substrate-binding protein | C5C18_00545 | Not Available | Negative | 104250 - 105887 | 57611.2 |
| dna primase | C5C18_00550 | Not Available | Negative | 106124 - 107983 | 67744.6 |
| deoxyguanosinetriphosphate triphosphohydrolase | C5C18_00560 | Not Available | Negative | 108312 - 109562 | 46306.9 |
| trna dihydrouridine synthase dusb | C5C18_00565 | Not Available | Negative | 109555 - 110781 | 43272.5 |
| hypothetical protein | C5C18_00570 | Not Available | Positive | 110845 - 111342 | 17431.8 |
| aminotransferase | C5C18_00575 | Not Available | Negative | 111347 - 112414 | 37460.0 |
| isoprenyl transferase | C5C18_00585 | Not Available | Negative | 113372 - 114175 | 30233.2 |
| dna repair protein reco | C5C18_00590 | Not Available | Negative | 114172 - 114894 | 25685.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |