Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | C5C18_05155 | Not Available | Negative | 1117980 - 1118990 | 35019.4 |
| pyrroline-5-carboxylate reductase | C5C18_05160 | Not Available | Positive | 1119083 - 1119937 | 28994.8 |
| trka family potassium uptake protein | C5C18_05165 | Not Available | Negative | 1120045 - 1120716 | 24104.0 |
| potassium transporter trk | C5C18_05170 | Not Available | Negative | 1120709 - 1122133 | 50262.7 |
| arsr family transcriptional regulator | C5C18_05175 | Not Available | Positive | 1122240 - 1122686 | 16177.4 |
| aurkaip1/cox24 domain-containing protein | C5C18_05180 | Not Available | Positive | 1122802 - 1122900 | 4083.36 |
| thioredoxin family protein | C5C18_05185 | Not Available | Positive | 1122997 - 1123257 | 9606.52 |
| hypothetical protein | C5C18_05190 | Not Available | Positive | 1123419 - 1124903 | 48406.9 |
| aspartate--trna(asn) ligase | C5C18_05195 | Not Available | Negative | 1125016 - 1126647 | 60765.8 |
| kr domain-containing protein | C5C18_05200 | Not Available | Positive | 1126646 - 1127410 | 26654.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |