Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fucose 4-o-acetylase | C5C18_05055 | Not Available | Positive | 1096562 - 1097650 | 40889.6 |
| bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase | C5C18_05060 | Not Available | Positive | 1097763 - 1099091 | 47555.9 |
| homoserine o-acetyltransferase | C5C18_05065 | Not Available | Positive | 1099202 - 1100431 | 43707.4 |
| atp-binding protein | C5C18_05070 | Not Available | Positive | 1100539 - 1101696 | 40063.8 |
| hypothetical protein | C5C18_05075 | Not Available | Positive | 1101693 - 1102937 | 43514.9 |
| dna-binding response regulator | C5C18_05080 | Not Available | Positive | 1102990 - 1103649 | 23643.6 |
| alcohol dehydrogenase | C5C18_05085 | Not Available | Negative | 1103825 - 1104862 | 34989.0 |
| mfs transporter | C5C18_05090 | Not Available | Negative | 1105127 - 1106341 | 40845.7 |
| thiamine-binding protein | C5C18_05095 | Not Available | Negative | 1106480 - 1106782 | 10562.5 |
| hypothetical protein | C5C18_05100 | Not Available | Negative | 1106833 - 1108134 | 46783.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |