Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_05005 | Not Available | Positive | 1089197 - 1089460 | 9874.67 |
| antar domain-containing protein | C5C18_05010 | Not Available | Positive | 1089457 - 1090158 | 24547.8 |
| antar domain-containing protein | C5C18_05015 | Not Available | Positive | 1090172 - 1090885 | 25735.4 |
| protease | C5C18_05020 | Not Available | Negative | 1091495 - 1092376 | 31204.3 |
| lema family protein | C5C18_05025 | Not Available | Negative | 1092386 - 1092952 | 21134.3 |
| n-acetyltransferase | C5C18_05030 | Not Available | Negative | 1093024 - 1093602 | 21950.5 |
| uracil-dna glycosylase | C5C18_05035 | Not Available | Negative | 1093669 - 1094397 | 25730.9 |
| peptidase s51 | C5C18_05040 | Not Available | Negative | 1094360 - 1095085 | 24140.8 |
| phosphoribosyltransferase | C5C18_05045 | Not Available | Negative | 1095082 - 1095612 | 18843.7 |
| sdr family nad(p)-dependent oxidoreductase | C5C18_05050 | Not Available | Negative | 1095655 - 1096413 | 26279.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |