Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-undet | Not Available | Not Available | Positive | 1027782 - 1027858 | Not Available |
| chemotaxis protein | AO275_25725 | Not Available | Negative | 1027938 - 1029860 | 69291.6 |
| chemotaxis protein | AO275_25730 | Not Available | Positive | 1030233 - 1032113 | 66926.5 |
| replication terminus site-binding protein | AO275_25735 | Not Available | Negative | 1032550 - 1033464 | 34234.5 |
| hypothetical protein | AO275_25740 | Not Available | Negative | 1033752 - 1034198 | 16680.5 |
| fimbrial protein | AO275_25750 | Not Available | Positive | 1035892 - 1036380 | 17591.7 |
| ssu ribosomal protein s2p (sae) | AO275_25755 | Not Available | Positive | 1036390 - 1037364 | 33657.4 |
| hypothetical protein | AO275_25760 | Not Available | Positive | 1037361 - 1037738 | 13578.5 |
| hypothetical protein | AO275_25765 | Not Available | Positive | 1037880 - 1038254 | 13364.2 |
| hypothetical protein | AO275_25770 | Not Available | Negative | 1038484 - 1038729 | 9350.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
