Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dehydratase | AO275_25670 | Not Available | Negative | 1012874 - 1013701 | 30427.7 |
| porin | AO275_25675 | Not Available | Negative | 1013879 - 1015147 | 46638.6 |
| 3-oxoacyl-acp reductase | AO275_25680 | Not Available | Positive | 1015628 - 1016392 | 26823.0 |
| abc transporter permease | AO275_25685 | Not Available | Positive | 1016818 - 1017645 | 30200.9 |
| sugar abc transporter atp-binding protein | AO275_25690 | Not Available | Positive | 1017635 - 1018996 | 50197.2 |
| glycosyl transferase family 2 | AO275_25695 | Not Available | Positive | 1018993 - 1023363 | 164511.0 |
| hypothetical protein | AO275_25700 | Not Available | Negative | 1023360 - 1025369 | 74286.8 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | AO275_25705 | Not Available | Negative | 1025401 - 1025754 | 12972.3 |
| glycosyl transferase family 2 | AO275_25710 | Not Available | Negative | 1025744 - 1026742 | 36635.7 |
| hypothetical protein | AO275_25715 | Not Available | Positive | 1026975 - 1027595 | 23665.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
